タイトル | Enzymatic catalysis favours eight-membered over five-membered ring closure in bicyclomycin biosynthesis |
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ジャーナル・号・ページ | Nat Catal, Vol. 6, Page 637-648, Year 2023 |
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掲載日 | 2021年8月9日 (構造データの登録日) |
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著者 | He, J.B. / Wu, L. / Wei, W. / Meng, S. / Liu, Z.T. / Wu, X. / Pan, H.X. / Yang, S. / Liang, Y. / Zhou, J. / Tang, G.L. |
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リンク | Nat Catal / PubMedで検索 |
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手法 | X線回折 |
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解像度 | 1.83004663987 - 2.20005690487 Å |
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構造データ | PDB-7v2t: The complex structure of SoBcmB and its natural precursor 2 手法: X-RAY DIFFRACTION / 解像度: 2.20005690487 Å PDB-7v2u: The complex structure of SoBcmB and its product 2f 手法: X-RAY DIFFRACTION / 解像度: 2.00009920726 Å PDB-7v2x: The complex structure of soBcmB and its substrate 1 手法: X-RAY DIFFRACTION / 解像度: 2.0838742992 Å PDB-7v34: The complex structure of soBcmB and its product 1d 手法: X-RAY DIFFRACTION / 解像度: 2.00016906068 Å PDB-7v36: The complex structure of soBcmB and its intermediate product 2a 手法: X-RAY DIFFRACTION / 解像度: 1.96009167444 Å PDB-7v3e: The complex structure of soBcmB and its intermediate product 1a 手法: X-RAY DIFFRACTION / 解像度: 2.12 Å PDB-7v3n: The complex structure of soBcmB-D307A and its natural precursor 2 手法: X-RAY DIFFRACTION / 解像度: 1.85001100152 Å PDB-7v3o: The structure of Se-SoBcmB with Fe(II)and AKG 手法: X-RAY DIFFRACTION / 解像度: 1.83004663987 Å PDB-8hiv: The structure of apo-SoBcmB with Fe(II) and AKG 手法: X-RAY DIFFRACTION / 解像度: 2.2000308002 Å |
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化合物 | ChemComp-5UQ: (3S,6S)-3-((R)-2,3-dihydroxy-2-methylpropyl)-6-((S)-4-hydroxybutan-2-yl)piperazine-2,5-dione
ChemComp-8KI: (1S,5S,6S)-5-methyl-1-[(1S,2S)-2-methyl-1,2,3-tris(oxidanyl)propyl]-2-oxa-7,9-diazabicyclo[4.2.2]decane-8,10-dione
ChemComp-7QX: (3S,6S)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propyl]piperazine-2,5-dion
ChemComp-5NF: (3S,4S,5S,8S)-8-[(2S)-butan-2-yl]-3-methyl-3,4-bis(oxidanyl)-1-oxa-7,10-diazaspiro[4.5]decane-6,9-dione
ChemComp-5P0: (3Z,6S)-3-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]-6-[(2S)-4-oxidanylbutan-2-yl]piperazine-2,5-dione
ChemComp-5WI: (3S,6Z)-3-[(2S)-butan-2-yl]-6-[(2R)-2-methyl-2,3-bis(oxidanyl)propylidene]piperazine-2,5-dione
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由来 | - streptomyces ossamyceticus (バクテリア)
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キーワード | OXIDOREDUCTASE / complex / bicyclomycin / oxa-bridged eight-membered heterocycle / dioxygenases / side way / oxa-bridged / dioxygenase / mutant / apo-form |
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