タイトル | Substrate Enolate Intermediate and Mimic Captured in the Active Site of Streptomyces coelicolor Methylmalonyl-CoA Epimerase. |
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ジャーナル・号・ページ | Chembiochem, Vol. 23, Page e202100487-e202100487, Year 2022 |
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掲載日 | 2020年4月3日 (構造データの登録日) |
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著者 | Stunkard, L.M. / Benjamin, A.B. / Bower, J.B. / Huth, T.J. / Lohman, J.R. |
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リンク | Chembiochem / PubMed:34856049 |
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手法 | X線回折 |
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解像度 | 1.37 - 1.84 Å |
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構造データ | PDB-6wf6: Streptomyces coelicolor methylmalonyl-CoA epimerase 手法: X-RAY DIFFRACTION / 解像度: 1.39 Å PDB-6wf7: Methylmalonyl-CoA epimerase in complex with methylmalonyl-CoA and NH4+ 手法: X-RAY DIFFRACTION / 解像度: 1.55 Å PDB-6wfh: Streptomyces coelicolor methylmalonyl-CoA epimerase substrate complex 手法: X-RAY DIFFRACTION / 解像度: 1.84 Å PDB-6wfi: Methylmalonyl-CoA epimerase in complex with 2-nitronate-propionyl-CoA 手法: X-RAY DIFFRACTION / 解像度: 1.37 Å |
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化合物 | ChemComp-V0V: (3S,5R,9R,19E)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9,19-tetrahydroxy-8,8,20-trimethyl-10,14-dioxo-2,4,6-trioxa-18-thia-11,15-diaza-3,5-diphosphahenicos-19-en-21-oic acid 3,5-dioxide (non-preferred name)
ChemComp-KFV: [1-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethylsulfanyl]-1-oxidanylidene-propan-2-ylidene]-bis(oxidanidyl)azanium
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由来 | streptomyces coelicolor (バクテリア)
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キーワード | ISOMERASE / Epimerase / acid-base / enol / enolate |
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