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Structure paper

TitleStable monomers in the ancestral sequence reconstruction of the last opisthokont common ancestor of dimeric triosephosphate isomerase.
Journal, issue, pagesProtein Sci., Vol. 33, Page e5134-e5134, Year 2024
Publish dateNov 17, 2023 (structure data deposition date)
AuthorsPerez-Nino, J.A. / Guerra, Y. / Diaz-Salazar, A.J. / Costas, M. / Rodriguez-Romero, A. / Fernandez-Velasco, D.A.
External linksProtein Sci. / PubMed:39145435
MethodsX-ray diffraction
Resolution1.38 - 2.16 Å
Structure data

PDB-8v09:
Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by bayesian inference with PGH
Method: X-RAY DIFFRACTION / Resolution: 1.61 Å

PDB-8v0a:
Crystal Structure of the worst case of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood with PGH
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-8v2w:
Crystal Structure of the ancestral triosephosphate isomerase reconstruction of the last opisthokont common ancestor obtained by Bayesian inference
Method: X-RAY DIFFRACTION / Resolution: 1.38 Å

PDB-8v2x:
Crystal Structure of the reconstruction of the worst case of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by bayesian inference
Method: X-RAY DIFFRACTION / Resolution: 1.43 Å

PDB-8w05:
Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood
Method: X-RAY DIFFRACTION / Resolution: 2.16 Å

PDB-8w06:
Crystal Structure of the reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood with PGH
Method: X-RAY DIFFRACTION / Resolution: 2.06 Å

PDB-8w08:
Crystal Structure of the worst case reconstruction of the ancestral triosephosphate isomerase of the last opisthokont common ancestor obtained by maximum likelihood
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-ACY:
ACETIC ACID

ChemComp-FMT:
FORMIC ACID

ChemComp-PGH:
PHOSPHOGLYCOLOHYDROXAMIC ACID

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-ACT:
ACETATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-CL:
Unknown entry

ChemComp-F:
FLUORIDE ION

Source
  • synthetic construct (others)
KeywordsISOMERASE / Triose phosphate isomerase / Ancestral sequence reconstruction / Triosephosphate isomerase

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