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TitleRedox-controlled reorganization and flavin strain within the ribonucleotide reductase R2b-NrdI complex monitored by serial femtosecond crystallography.
Journal, issue, pagesElife, Vol. 11, Year 2022
Publish dateMar 2, 2022 (structure data deposition date)
AuthorsJohn, J. / Aurelius, O. / Srinivas, V. / Saura, P. / Kim, I.S. / Bhowmick, A. / Simon, P.S. / Dasgupta, M. / Pham, C. / Gul, S. ...John, J. / Aurelius, O. / Srinivas, V. / Saura, P. / Kim, I.S. / Bhowmick, A. / Simon, P.S. / Dasgupta, M. / Pham, C. / Gul, S. / Sutherlin, K.D. / Aller, P. / Butryn, A. / Orville, A.M. / Cheah, M.H. / Owada, S. / Tono, K. / Fuller, F.D. / Batyuk, A. / Brewster, A.S. / Sauter, N.K. / Yachandra, V.K. / Yano, J. / Kaila, V.R.I. / Kern, J. / Lebrette, H. / Hogbom, M.
External linksElife / PubMed:36083619
MethodsX-ray diffraction
Resolution2 Å
Structure data

PDB-7z3d:
XFEL structure of Class Ib ribonucleotide reductase dimanganese(II) NrdF in complex with oxidized NrdI from Bacillus cereus
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-7z3e:
XFEL structure of Class Ib ribonucleotide reductase dimanganese(II) NrdF in complex with hydroquinone NrdI from Bacillus cereus
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-UNX:
Unknown entry

ChemComp-FMN:
FLAVIN MONONUCLEOTIDE

ChemComp-HOH:
WATER

ChemComp-FNR:
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL

Source
  • bacillus cereus atcc 14579 (bacteria)
KeywordsOXIDOREDUCTASE / Ribonucleotide reductase R2b / Class Ib RNR / Flavoprotein / Metalloenzyme / ferritin-like superfamily / dimanganese cofactor / XFEL

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