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Structure paper

TitleA small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Journal, issue, pagesNat Commun, Vol. 13, Page 5453-5453, Year 2022
Publish dateJun 26, 2014 (structure data deposition date)
AuthorsLiu, Y. / Iqbal, A. / Li, W. / Ni, Z. / Wang, Y. / Ramprasad, J. / Abraham, K.J. / Zhang, M. / Zhao, D.Y. / Qin, S. ...Liu, Y. / Iqbal, A. / Li, W. / Ni, Z. / Wang, Y. / Ramprasad, J. / Abraham, K.J. / Zhang, M. / Zhao, D.Y. / Qin, S. / Loppnau, P. / Jiang, H. / Guo, X. / Brown, P.J. / Zhen, X. / Xu, G. / Mekhail, K. / Ji, X. / Bedford, M.T. / Greenblatt, J.F. / Min, J.
External linksNat Commun / PubMed:36114190
MethodsX-ray diffraction
Resolution1.15 - 2.28 Å
Structure data

PDB-4qq6:
Crystal Structure of tudor domain of SMN1 in complex with a small organic molecule
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-4qqd:
Crystal Structure of tandem tudor domains of UHRF1 in complex with a small organic molecule
Method: X-RAY DIFFRACTION / Resolution: 2.28 Å

PDB-6v9t:
Tudor domain of TDRD3 in complex with a small molecule
Method: X-RAY DIFFRACTION / Resolution: 2.154 Å

PDB-7w2p:
Tudor domain of SMN in complex with a small molecule
Method: X-RAY DIFFRACTION / Resolution: 1.15 Å

PDB-7w30:
Tudor domain of SMN in complex with a small molecule
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-UNX:
Unknown entry

ChemComp-36X:
4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine

ChemComp-HOH:
WATER

ChemComp-8AI:
2-[(4-fluorophenyl)methyl]-2-azatricyclo[7.3.0.0^{3,7}]dodeca-1(9),3(7)-dien-8-imine

ChemComp-MG:
Unknown entry

ChemComp-8AT:
1,2-dimethylquinolin-4-imine

Source
  • homo sapiens (human)
KeywordsRNA BINDING PROTEIN / structural genomics / Structural Genomics Consortium / SGC / LIGASE / TRANSFERASE / SMN / Tudor / small molecule / Tudor domain

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