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Structure paper

TitleActive site geometry of a novel aminopropyltransferase for biosynthesis of hyperthermophile-specific branched-chain polyamine.
Journal, issue, pagesFEBS J., Vol. 284, Page 3684-3701, Year 2017
Publish dateMay 22, 2017 (structure data deposition date)
AuthorsHidese, R. / Tse, K.M. / Kimura, S. / Mizohata, E. / Fujita, J. / Horai, Y. / Umezawa, N. / Higuchi, T. / Niitsu, M. / Oshima, T. ...Hidese, R. / Tse, K.M. / Kimura, S. / Mizohata, E. / Fujita, J. / Horai, Y. / Umezawa, N. / Higuchi, T. / Niitsu, M. / Oshima, T. / Imanaka, T. / Inoue, T. / Fujiwara, S.
External linksFEBS J. / PubMed:28881427
MethodsX-ray diffraction
Resolution1.84 - 1.95 Å
Structure data

PDB-5xnc:
Crystal structure of the branched-chain polyamine synthase (BpsA) in complex with N4-aminopropylspermidine and 5-methylthioadenosine
Method: X-RAY DIFFRACTION / Resolution: 1.84 Å

PDB-5xnf:
Crystal structure of the branched-chain polyamine synthase (BpsA) from Thermococcus kodakarensis
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-5xnh:
Crystal structure of the branched-chain polyamine synthase (BpsA) in complex with spermidine
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-MTA:
5'-DEOXY-5'-METHYLTHIOADENOSINE

ChemComp-N4P:
N,N-bis(3-aminopropyl)butane-1,4-diamine

ChemComp-GOL:
GLYCEROL

ChemComp-FE:
Unknown entry

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-SPD:
SPERMIDINE

Source
  • thermococcus kodakarensis (strain atcc baa-918 / jcm 12380 / kod1) (archaea)
KeywordsTRANSFERASE / Polyamine biosynthesis / spermidine / N4-aminopropylspermidine / Branched polyamines / N(4)-bis(aminopropyl)spermidine synthase

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