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Structure paper

TitleStructural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Journal, issue, pagesCell Host Microbe, Vol. 19, Page 55-66, Year 2016
Publish dateDec 8, 2015 (structure data deposition date)
AuthorsMoonens, K. / Gideonsson, P. / Subedi, S. / Bugaytsova, J. / Romao, E. / Mendez, M. / Norden, J. / Fallah, M. / Rakhimova, L. / Shevtsova, A. ...Moonens, K. / Gideonsson, P. / Subedi, S. / Bugaytsova, J. / Romao, E. / Mendez, M. / Norden, J. / Fallah, M. / Rakhimova, L. / Shevtsova, A. / Lahmann, M. / Castaldo, G. / Brannstrom, K. / Coppens, F. / Lo, A.W. / Ny, T. / Solnick, J.V. / Vandenbussche, G. / Oscarson, S. / Hammarstrom, L. / Arnqvist, A. / Berg, D.E. / Muyldermans, S. / Boren, T. / Remaut, H.
External linksCell Host Microbe / PubMed:26764597
MethodsX-ray diffraction
Resolution2.17 - 2.99 Å
Structure data

PDB-5f7k:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with Nanobody Nb-ER19
Method: X-RAY DIFFRACTION / Resolution: 2.17 Å

PDB-5f7l:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with Nanobody Nb-ER14
Method: X-RAY DIFFRACTION / Resolution: 2.74 Å

PDB-5f7m:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group H Lewis b hexasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.72 Å

PDB-5f7n:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A Lewis b pentasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.28 Å

PDB-5f7w:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group B Lewis b heptasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.81 Å

PDB-5f7y:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A type-1 hexasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.44 Å

PDB-5f8q:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain S831 in complex with Nanobody Nb-ER19
Method: X-RAY DIFFRACTION / Resolution: 2.59 Å

PDB-5f8r:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain S831 in complex with blood group H Lewis b hexasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.44 Å

PDB-5f93:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain A730 in complex with blood group H Lewis b hexasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.99 Å

PDB-5f97:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain A730 in complex with blood group A type 1 hexasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.62 Å

PDB-5f9a:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain P436 in complex with blood group H Lewis b hexasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.44 Å

PDB-5f9d:
Blood group antigen binding adhesin BabA of Helicobacter pylori strain P436 in complex with Lewis b blood group B heptasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.59 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

Source
  • helicobacter pylori (bacteria)
  • lama glama (llama)
  • vicugna pacos (alpaca)
KeywordsCELL ADHESION / Adhesin / Lectin / Nanobody / Complex

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