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TitleStructure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.
Journal, issue, pagesStructure, Vol. 20, Page 101-112, Year 2012
Publish dateMar 18, 2011 (structure data deposition date)
AuthorsCellitti, S.E. / Shaffer, J. / Jones, D.H. / Mukherjee, T. / Gurumurthy, M. / Bursulaya, B. / Boshoff, H.I. / Choi, I. / Nayyar, A. / Lee, Y.S. ...Cellitti, S.E. / Shaffer, J. / Jones, D.H. / Mukherjee, T. / Gurumurthy, M. / Bursulaya, B. / Boshoff, H.I. / Choi, I. / Nayyar, A. / Lee, Y.S. / Cherian, J. / Niyomrattanakit, P. / Dick, T. / Manjunatha, U.H. / Barry, C.E. / Spraggon, G. / Geierstanger, B.H.
External linksStructure / PubMed:22244759
MethodsX-ray diffraction
Resolution1.503 - 2.101 Å
Structure data

PDB-3r5l:
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-3r5p:
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3r5r:
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824, with co-factor F420
Method: X-RAY DIFFRACTION / Resolution: 2.101 Å

PDB-3r5w:
Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824, with co-factor F420
Method: X-RAY DIFFRACTION / Resolution: 1.786 Å

PDB-3r5y:
Structure of a Deazaflavin-dependent nitroreductase from Nocardia farcinica, with co-factor F420
Method: X-RAY DIFFRACTION / Resolution: 1.801 Å

PDB-3r5z:
Structure of a Deazaflavin-dependent reductase from Nocardia farcinica, with co-factor F420
Method: X-RAY DIFFRACTION / Resolution: 1.503 Å

Chemicals

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-F42:
COENZYME F420

Source
  • mycobacterium tuberculosis (bacteria)
  • nocardia farcinica (bacteria)
KeywordsOXIDOREDUCTASE / PA-824 / split barrel-like fold / DUF385 / Deazaflavin-dependent nitroreductase / nitroimidazoles / co-factor / OPC-67683 / split barrel-like fold; DUF385 / F420 / UNKNOWN FUNCTION / deazaflavin-dependent reductase / F420-dependent reductase / FDR

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