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Structure paper

TitleMerging the binding sites of aldose and aldehyde reductase for detection of inhibitor selectivity-determining features.
Journal, issue, pagesJ. Mol. Biol., Vol. 379, Page 991-1016, Year 2008
Publish dateMar 31, 2007 (structure data deposition date)
AuthorsSteuber, H. / Heine, A. / Podjarny, A. / Klebe, G.
External linksJ. Mol. Biol. / PubMed:18495158
MethodsX-ray diffraction
Resolution1.42 - 1.75 Å
Structure data

PDB-2pd5:
Human aldose reductase mutant V47I complexed with zopolrestat
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-2pd9:
Human aldose reductase mutant V47I complexed with fidarestat.
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2pdb:
Human aldose reductase mutant F121P complexed with zopolrestat.
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-2pdc:
Human aldose reductase mutant F121P complexed with IDD393.
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-2pdf:
Human aldose reductase mutant L300P complexed with zopolrestat.
Method: X-RAY DIFFRACTION / Resolution: 1.56 Å

PDB-2pdg:
Human aldose reductase with uracil-type inhibitor at 1.42A.
Method: X-RAY DIFFRACTION / Resolution: 1.42 Å

PDB-2pdh:
Human aldose reductase mutant L300P complexed with uracil-type inhibitor at 1.45 A.
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-2pdi:
Human aldose reductase mutant L300A complexed with zopolrestat at 1.55 A.
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2pdj:
Human aldose reductase mutant L300A complexed with IDD393.
Method: X-RAY DIFFRACTION / Resolution: 1.57 Å

PDB-2pdk:
Human aldose reductase mutant L301M complexed with sorbinil.
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2pdl:
Human aldose reductase mutant L301M complexed with tolrestat.
Method: X-RAY DIFFRACTION / Resolution: 1.47 Å

PDB-2pdm:
Human aldose reductase mutant S302R complexed with zopolrestat.
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-2pdn:
Human aldose reductase mutant S302R complexed with uracil-type inhibitor.
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2pdp:
Human aldose reductase mutant S302R complexed with IDD 393.
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-2pdq:
Human aldose reductase mutant C303D complexed with uracil-type inhibitor.
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

PDB-2pdu:
Human aldose reductase mutant C303D complexed with IDD393.
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2pdw:
Human aldose reductase mutant C303D complexed with fidarestat.
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-2pdx:
Human aldose reductase double mutant S302R-C303D complexed with zopolrestat.
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-2pdy:
Human aldose reductase double mutant S302R-C303D complexed with fidarestat.
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

Chemicals

ChemComp-NAP:
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

ChemComp-ZST:
3,4-DIHYDRO-4-OXO-3-((5-TRIFLUOROMETHYL-2-BENZOTHIAZOLYL)METHYL)-1-PHTHALAZINE ACETIC ACID

ChemComp-HOH:
WATER

ChemComp-FID:
(2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE / inhibitor*YM

ChemComp-393:
(5-CHLORO-2-{[(3-NITROBENZYL)AMINO]CARBONYL}PHENOXY)ACETIC ACID

ChemComp-47D:
{3-[(5-CHLORO-1,3-BENZOTHIAZOL-2-YL)METHYL]-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL}ACETIC ACID

ChemComp-SBI:
SORBINIL / inhibitor*YM

ChemComp-TOL:
TOLRESTAT / inhibitor*YM

Source
  • homo sapiens (human)
KeywordsOXIDOREDUCTASE / TIM barrel / V47I mutant / protein-ligand complex / TIM-barrel / mutant

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