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Structure paper

TitleEscherichia coli acid resistance: pH-sensing, activation by chloride and autoinhibition in GadB
Journal, issue, pagesEmbo J., Vol. 25, Page 2643-2651, Year 2006
Publish dateMar 14, 2006 (structure data deposition date)
AuthorsGut, H. / Pennacchietti, E. / John, R.A. / Bossa, F. / Capitani, G. / De Biase, D. / Gruetter, M.G.
External linksEmbo J. / PubMed:16675957
MethodsX-ray diffraction
Resolution1.9 - 3.15 Å
Structure data

PDB-2dgk:
Crystal structure of an N-terminal deletion mutant of Escherichia coli GadB in an autoinhibited state (aldamine)
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-2dgl:
Crystal structure of Escherichia coli GadB in complex with bromide
Method: X-RAY DIFFRACTION / Resolution: 3.15 Å

PDB-2dgm:
Crystal structure of Escherichia coli GadB in complex with iodide
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-BR:
BROMIDE ION

ChemComp-ACY:
ACETIC ACID

ChemComp-IOD:
IODIDE ION

ChemComp-FMT:
FORMIC ACID

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

Source
  • escherichia coli (E. coli)
KeywordsLYASE / GadB / GadBD1-14 / autoinhibition / substituted aldamine / GadB complexed with bromide / GadB complexed with iodide

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