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TitleCryo-EM structure of cyanophage P-SCSP1u offers insights into DNA gating and evolution of T7-like viruses.
Journal, issue, pagesNat Commun, Vol. 14, Issue 1, Page 6438, Year 2023
Publish dateOct 13, 2023
AuthorsLanlan Cai / Hang Liu / Wen Zhang / Shiwei Xiao / Qinglu Zeng / Shangyu Dang /
PubMed AbstractCyanophages, together with their host cyanobacteria, play important roles in marine biogeochemical cycles and control of marine food webs. The recently identified MPP-C (Marine Picocyanobacteria ...Cyanophages, together with their host cyanobacteria, play important roles in marine biogeochemical cycles and control of marine food webs. The recently identified MPP-C (Marine Picocyanobacteria Podovirus clade C) cyanophages, belonging to the T7-like podoviruses, contain the smallest genomes among cyanopodoviruses and exhibit distinct infection kinetics. However, understanding of the MPP-C cyanophage infection process is hindered by the lack of high-resolution structural information. Here, we report the cryo-EM structure of the cyanophage P-SCSP1u, a representative member of the MPP-C phages, in its native form at near-atomic resolution, which reveals the assembly mechanism of the capsid and molecular interaction of the portal-tail complex. Structural comparison of the capsid proteins of P-SCSP1u and other podoviruses with known structures provides insights into the evolution of T7-like viruses. Furthermore, our study provides the near-atomic resolution structure of portal-tail complex for T7-like viruses. On the basis of previously reported structures of phage T7, we identify an additional valve and gate to explain the DNA gating mechanism for the T7-like viruses.
External linksNat Commun / PubMed:37833330 / PubMed Central
MethodsEM (single particle)
Resolution3.23 - 3.81 Å
Structure data

EMDB-35174, PDB-8i4l:
Capsid structure of the Cyanophage P-SCSP1u
Method: EM (single particle) / Resolution: 3.23 Å

EMDB-35175, PDB-8i4m:
Portal-tail complex structure of the Cyanophage P-SCSP1u
Method: EM (single particle) / Resolution: 3.81 Å

Source
  • prochlorococcus phage p-scsp1u (virus)
KeywordsVIRUS / Whole virus / Capsid / cyanophage / T7-like virus

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