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TitleStructure of scFv76 in complex with SARS-CoV-2 Omicron Spike protein
Journal, issue, pagesTo Be Published
Publish dateMay 25, 2024 (structure data deposition date)
AuthorsChaves-Sanjuan A / Bolognesi M
External linksSearch PubMed
MethodsEM (single particle)
Resolution3.0 - 3.8 Å
Structure data

EMDB-50423: SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76
Method: EM (single particle) / Resolution: 3.17 Å

50424

9fgt

EMDB-50424, PDB-9fgt:
SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76 (focused refinement)
Method: EM (single particle) / Resolution: 3.8 Å

EMDB-50425: SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein, with two RBD up and one RBD down. Single chain fragment scFv76 bound to the two RBD up
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-50426: SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein, with two RBD up and one RBD down.
Method: EM (single particle) / Resolution: 3.0 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

Source
  • severe acute respiratory syndrome coronavirus 2
  • homo sapiens (human)
  • enterobacteria phage t4 (virus)
KeywordsVIRAL PROTEIN / SARS-CoV-2 / Spike / single chain fragment

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