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Structure paper

TitleCrystallographic Trapping of a Covalently Modified Heme in a Dye-Decolorizing Peroxidase
Journal, issue, pagesTo be Published
Publish dateJan 27, 2015 (structure data deposition date)
AuthorsStrittmatter, E. / Piontek, K. / Plattner, D.A.
External linksSearch PubMed
MethodsX-ray diffraction
Resolution1.75 - 1.85 Å
Structure data

PDB-5ag0:
DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) crystallized at pH 6.5
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-5ag1:
DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) with meso- nitrated heme
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

Chemicals

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-CAC:
CACODYLATE ION

ChemComp-FMT:
FORMIC ACID

ChemComp-GOL:
GLYCEROL

ChemComp-GOA:
GLYCOLIC ACID

ChemComp-HOH:
WATER

ChemComp-N7H:
DELTA-MESO NITROHEME

ChemComp-NO2:
NITRITE ION

Source
  • auricularia auricula-judae (ear fungus)
KeywordsOXIDOREDUCTASE / DYE-DECOLORIZING PEROXIDASE / DYP / FUNGAL / HEME / GLYCOPROTEIN / NITRATION

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