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TitleStructural Insights into the Substrate Recognition Mechanism of an ATP-Grasp Peptide-Ligase Producing Diverse Dipeptides Containing Unnatural Amino Acids
Journal, issue, pagesAcs Catalysis, Vol. 15, Page 2550-2560, Year 2025
Publish dateMar 11, 2024 (structure data deposition date)
AuthorsYan, Y.Q. / Li, S.Y. / Wu, X.N. / Zhou, T. / Li, J.X. / Huang, S.X. / Zheng, J.T. / Xu, J. / Da, L.T. / Xu, M.J.
External linksAcs Catalysis / Search PubMed
MethodsX-ray diffraction
Resolution2.19 - 2.45 Å
Structure data

PDB-8ynd:
ATP-grasp peptide ligase from Streptomyces
Method: X-RAY DIFFRACTION / Resolution: 2.19 Å

PDB-8ynq:
ATP-grasp peptide ligase from Streptomyces
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

ChemComp-GOL:
GLYCEROL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

Source
  • streptomyces albogriseolus 1-36 (bacteria)
KeywordsLIGASE / ATP-grasp enzymes / Peptide ligase / Amide synthase

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