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Structure paper

TitleA novel and highly specific Forssman antigen-binding protein from sheep polyomavirus
Journal, issue, pagesBiorxiv, Year 2023
Publish dateDec 8, 2020 (structure data deposition date)
AuthorsRustmeier, N.H. / Silva, L.M. / Di Maio, A. / Mueller, J.C. / Herrmann, A. / Feizi, T. / Liu, Y. / Stehle, T.
External linksBiorxiv / Search PubMed
MethodsX-ray diffraction
Resolution1.701 - 1.923 Å
Structure data

PDB-7b6s:
Sheep Polyomavirus VP1 in complex with 10 mM Forssman antigen pentaose
Method: X-RAY DIFFRACTION / Resolution: 1.923 Å

PDB-7b6t:
Sheep Polyomavirus VP1 in complex with 10 mM globo-N-tetraose
Method: X-RAY DIFFRACTION / Resolution: 1.701 Å

PDB-7b6u:
Sheep Polyomavirus VP1 in complex with 5 mM Forssman antigen pentaose and 20 mM 6'-sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 1.901 Å

PDB-7b6v:
Sheep Polyomavirus VP1 in complex with 5 mM Forssman antigen pentaose and 20 mM 3'-sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 1.798 Å

Chemicals

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-MG:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-HOH:
WATER

ChemComp-K:
Unknown entry

ChemComp-SIA:
N-acetyl-alpha-neuraminic acid

Source
  • sheep polyomavirus 1
KeywordsVIRAL PROTEIN / polyomavirus / capsid protein / VP1 / glycan complex

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