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Structure paper

TitleActive site plasticity and possible modes of chemical inhibition of the human DNA deaminase APOBEC3B
Journal, issue, pagesFaseb Bioadv, Vol. 2, Page 49-58, Year 2020
Publish dateDec 20, 2018 (structure data deposition date)
AuthorsShi, K. / Demir, O. / Carpenter, M.A. / Banerjee, S. / Harki, D.A. / Amaro, R.E. / Harris, R.S. / Aihara, H.
External linksFaseb Bioadv / Search PubMed
MethodsX-ray diffraction
Resolution1.731 - 2.53 Å
Structure data

PDB-6nfk:
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B with loop 7 from APOBEC3G bound to iodide
Method: X-RAY DIFFRACTION / Resolution: 1.86 Å

PDB-6nfl:
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B with loop 7 from APOBEC3G complexed with 2-HP
Method: X-RAY DIFFRACTION / Resolution: 1.731 Å

PDB-6nfm:
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B with loop 7 from APOBEC3G
Method: X-RAY DIFFRACTION / Resolution: 2.53 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-IOD:
IODIDE ION

ChemComp-HOH:
WATER

ChemComp-L60:
1,3-diazinan-2-one

ChemComp-71O:
pyrimidin-2-ol

ChemComp-CL:
Unknown entry

Source
  • homo sapiens (human)
KeywordsHYDROLASE / APOBEC / deaminase

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