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Structure paper

TitleHigh-throughput protein crystallography to empower natural product-based drug discovery.
Journal, issue, pagesActa Crystallogr. ,Sect. F, Vol. 81, Page 179-192, Year 2025
Publish dateMar 5, 2024 (structure data deposition date)
AuthorsMeneghello, R. / Rustiguel, J.K. / de Araujo, E.A. / de Felicio, R. / Fernandes, A.Z.N. / Ferreira, E.L.F. / Gubiani, J.R. / Takeda, A.A.S. / Araujo, A. / de Lima Silva, C.C. ...Meneghello, R. / Rustiguel, J.K. / de Araujo, E.A. / de Felicio, R. / Fernandes, A.Z.N. / Ferreira, E.L.F. / Gubiani, J.R. / Takeda, A.A.S. / Araujo, A. / de Lima Silva, C.C. / Bertonha, A.F. / Urano, R.P.M. / Trindade, D.M. / Cunha, T.M. / Cardoso, A.C. / Berlinck, R.G.S. / Nascimento, A.F.Z. / Trivella, D.B.B.
External linksActa Crystallogr. ,Sect. F / PubMed:40237633
MethodsX-ray diffraction
Resolution2.91 - 3.44 Å
Structure data

PDB-9aw3:
Yeast 20S proteasome soaked with MA9 crude extract
Method: X-RAY DIFFRACTION / Resolution: 3.42 Å

PDB-9aw5:
Yeast 20S proteasome soaked with MA9 fraction E/F
Method: X-RAY DIFFRACTION / Resolution: 3.44 Å

PDB-9aw6:
Yeast 20S proteasome soaked with MA9 fraction EF2
Method: X-RAY DIFFRACTION / Resolution: 3.44 Å

PDB-9aw7:
Yeast 20S proteasome soaked with isolated TMC-95B
Method: X-RAY DIFFRACTION / Resolution: 2.91 Å

PDB-9c97:
Yeast 20S proteasome soaked with BRA-346 fraction
Method: X-RAY DIFFRACTION / Resolution: 3.33 Å

PDB-9c98:
Yeast 20S proteasome soaked with isolated TMC-86A
Method: X-RAY DIFFRACTION / Resolution: 3.04 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

PDB-1a9b:
DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS

PDB-1aha:
THE N-GLYCOSIDASE MECHANISM OF RIBOSOME-INACTIVATING PROTEINS IMPLIED BY CRYSTAL STRUCTURES OF ALPHA-MOMORCHARIN

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-ACY:
ACETIC ACID

PDB-1au6:
SOLUTION STRUCTURE OF DNA D(CATGCATG) INTERSTRAND-CROSSLINKED BY BISPLATIN COMPOUND (1,1/T,T), NMR, MINIMIZED AVERAGE STRUCTURE

Source
  • saccharomyces cerevisiae (brewer's yeast)
KeywordsHYDROLASE

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