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TitleStructural dynamics of human fatty acid synthase in the condensing cycle.
Journal, issue, pagesNature, Vol. 641, Issue 8062, Page 529-536, Year 2025
Publish dateFeb 20, 2025
AuthorsWooyoung Choi / Chengmin Li / Yifei Chen / YongQiang Wang / Yifan Cheng /
PubMed AbstractLong-chain fatty acids are the building blocks of fat in human bodies. In mammals, fatty acid synthase (FASN) contains multiple enzymatic domains to catalyse all chemical reactions needed for de novo ...Long-chain fatty acids are the building blocks of fat in human bodies. In mammals, fatty acid synthase (FASN) contains multiple enzymatic domains to catalyse all chemical reactions needed for de novo fatty acid synthesis. Although the chemical reactions carried out by these enzymatic domains are well defined, how the dimeric FASN with an open architecture continuously catalyses such reactions to synthesize a complete fatty acid remains elusive. Here, using a strategy of tagging and purifying endogenous FASN in HEK293T cells for single-particle cryo-electron microscopy studies, we characterized the structural dynamics of endogenous human FASN. We captured conformational snapshots of various functional substates in the condensing cycle and developed a procedure to analyse the particle distribution landscape of FASN with different orientations between its condensing and modifying wings. Together, our findings reveal that FASN function does not require a large rotational motion between its two main functional domains during the condensing cycle, and that the catalytic reactions in the condensing cycle carried out by the two monomers are unsynchronized. Our data thus provide a new composite view of FASN dynamics during the fatty acid synthesis condensing cycle.
External linksNature / PubMed:39978408 / PubMed Central
MethodsEM (single particle)
Resolution2 - 3.3 Å
Structure data

EMDB-44230: Human endogenous FASN alone - Class 1" to "Human endogenous FASN alone - Class 1 composite map
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-44231: Human endogenous FASN alone - Class 1 consensus map
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-44263: Human endogenous FASN alone - Class 1 focused modifying wing
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-44264: Human endogenous FASN alone - Class 1 focused condensing wing
Method: EM (single particle) / Resolution: 3.0 Å

EMDB-44267: Human endogenous FASN with Orlistat - composite map
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-44268: Human endogenous FASN with Orlistat - consensus map
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-44269: Human endogenous FASN with Orlistat - focused modifying wing
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-44270: Human endogenous FASN with Orlistat - focused condensing wing
Method: EM (single particle) / Resolution: 3.0 Å

EMDB-44295: Human endogenous FASN with 1,3-DBP - Class 2 composite map
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-44296: Human endogenous FASN with 1,3-DBP - Class 2 consensus map
Method: EM (single particle) / Resolution: 2.3 Å

EMDB-44297: Human endogenous FASN with 1,3-DPB - Class 2 focused modifying wing
Method: EM (single particle) / Resolution: 3.1 Å

EMDB-44298: Human endogenous FASN with 1,3-DBP - Class 2 focused condensing wing
Method: EM (single particle) / Resolution: 2.3 Å

EMDB-44300: Human endogenous FASN with 1,3-DBP - Class 1 composite map
Method: EM (single particle) / Resolution: 2.7 Å

EMDB-44301: Human endogenous FASN with 1,3-DBP - Class 1 consensus map
Method: EM (single particle) / Resolution: 2.7 Å

EMDB-44329, PDB-9b7z:
Human endogenous FASN with 1,3-DBP - Class 1 focused condensing wing
Method: EM (single particle) / Resolution: 2.5 Å

EMDB-44330, PDB-9b80:
Human endogenous FASN with 1,3-DBP - Class 1 focused modifying wing
Method: EM (single particle) / Resolution: 2.7 Å

EMDB-44371: Human endogenous FASN - combined class1 modifying wing with classification
Method: EM (single particle) / Resolution: 2.9 Å

EMDB-44378: Human endogenous FASN - combined class1 condensing wing with classification
PDB-9mj9: Condensing wing of FASN with phosphopantetheine-modified partial ACP
Method: EM (single particle) / Resolution: 2.9 Å

Source
  • homo sapiens (human)
KeywordsBIOSYNTHETIC PROTEIN / De novo fatty acid synthesis Fatty acid synthase / TRANSFERASE

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