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Structure paper

TitleBioisosteric replacement of pyridoxal-5'-phosphate to pyridoxal-5'-tetrazole targeting Bacillus subtilis GabR.
Journal, issue, pagesProtein Sci., Vol. 34, Page e70014-e70014, Year 2025
Publish dateFeb 5, 2024 (structure data deposition date)
AuthorsKaley, N.E. / Liveris, Z.J. / Moore, M. / Reidl, C.T. / Wawrzak, Z. / Becker, D.P. / Liu, D.
External linksProtein Sci. / PubMed:39720892
MethodsX-ray diffraction
Resolution1.85 - 2.24 Å
Structure data

PDB-8vxk:
Crystal Structure of the Apo Bacillus subtilis GabR C-terminal Effector-binding and Oligomerization Domain
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-8vxl:
Crystal Structure of the External Aldimine Complex of Pyridoxal-5'-Tetrazole and (S)-4-amino-5-phenoxypentanoate with the Bacillus subtilis GabR C-terminal Effector-binding and Oligomerization Domain
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

PDB-1aej:
SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (1-VINYLIMIDAZOLE)

ChemComp-LYS:
LYSINE

Source
  • bacillus subtilis (bacteria)
KeywordsTRANSCRIPTION / MocR / GabR / PLP / Transcription Regulator

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