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Structure paper

TitleStructural effects of high laser power densities on an early bacteriorhodopsin photocycle intermediate.
Journal, issue, pagesNat Commun, Vol. 15, Page 10278-10278, Year 2024
Publish dateMay 7, 2024 (structure data deposition date)
AuthorsBertrand, Q. / Nogly, P. / Nango, E. / Kekilli, D. / Khusainov, G. / Furrer, A. / James, D. / Dworkowski, F. / Skopintsev, P. / Mous, S. ...Bertrand, Q. / Nogly, P. / Nango, E. / Kekilli, D. / Khusainov, G. / Furrer, A. / James, D. / Dworkowski, F. / Skopintsev, P. / Mous, S. / Martiel, I. / Borjesson, P. / Ortolani, G. / Huang, C.Y. / Kepa, M. / Ozerov, D. / Brunle, S. / Panneels, V. / Tanaka, T. / Tanaka, R. / Tono, K. / Owada, S. / Johnson, P.J.M. / Nass, K. / Knopp, G. / Cirelli, C. / Milne, C. / Schertler, G. / Iwata, S. / Neutze, R. / Weinert, T. / Standfuss, J.
External linksNat Commun / PubMed:39604356
MethodsX-ray diffraction
Resolution1.44 - 2 Å
Structure data

PDB-9f9b:
Laser excitation effects on BR: reprocessed dark dataset recorded from Nango et al.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-9f9c:
Laser excitation effects on BR: Reprocessed Extrapolated 16 ns Light dataset recorded at 0.04 GW/cm2 from Nango et al.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-9f9d:
Laser excitation effects on BR: Dark dataset recorded at SwissFEL
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-9f9e:
Laser excitation effects on BR: Extrapolated 6 ps Light dataset recorded at 342 GW/cm2 at SwissFEL
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-9f9f:
Laser excitation effects on BR: Extrapolated 6 ps Light dataset recorded at 2493 GW/cm2 at SwissFEL
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-9f9g:
Laser excitation effects on BR: Reprocessed Dark from Nogly et al.
Method: X-RAY DIFFRACTION / Resolution: 1.44 Å

PDB-9f9h:
Laser excitation effects on BR: Reprocessed Extrapolated 10ps Light dataset recorded at 525 GW/cm2 from Nogly et al.
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

PDB-9f9i:
Laser excitation effects on BR: Dark dataset recorded at SACLA
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-9f9j:
Laser excitation effects on BR: Extrapolated 10ps Light dataset recorded at 1281 GW/cm2 at SACLA (+100ps, 1ns, 10ns)
Method: X-RAY DIFFRACTION / Resolution: 1.76 Å

Chemicals

ChemComp-LI1:
1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL

ChemComp-OLC:
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

ChemComp-RET:
RETINAL

ChemComp-HOH:
WATER

Source
  • halobacterium salinarum (Halophile)
KeywordsPROTON TRANSPORT / Bacteriorhodospin / Membrane / RETINAL / TIME-RESOLVED CRYSTALLOGRAPHY / SERIAL CRYSTALLOGRAPHY / Laser excitation

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