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TitleCrystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Journal, issue, pagesNat Commun, Vol. 15, Page 10165-10165, Year 2024
Publish dateApr 2, 2024 (structure data deposition date)
AuthorsMabanglo, M.F. / Wilson, B. / Noureldin, M. / Kimani, S.W. / Mamai, A. / Krausser, C. / Gonzalez-Alvarez, H. / Srivastava, S. / Mohammed, M. / Hoffer, L. ...Mabanglo, M.F. / Wilson, B. / Noureldin, M. / Kimani, S.W. / Mamai, A. / Krausser, C. / Gonzalez-Alvarez, H. / Srivastava, S. / Mohammed, M. / Hoffer, L. / Chan, M. / Avrumutsoae, J. / Li, A.S.M. / Hajian, T. / Tucker, S. / Green, S. / Szewczyk, M. / Barsyte-Lovejoy, D. / Santhakumar, V. / Ackloo, S. / Loppnau, P. / Li, Y. / Seitova, A. / Kiyota, T. / Wang, J.G. / Prive, G.G. / Kuntz, D.A. / Patel, B. / Rathod, V. / Vala, A. / Rout, B. / Aman, A. / Poda, G. / Uehling, D. / Ramnauth, J. / Halabelian, L. / Marcellus, R. / Al-Awar, R. / Vedadi, M.
External linksNat Commun / PubMed:39580491
MethodsX-ray diffraction
Resolution1.92 - 2.97 Å
Structure data

PDB-9b9h:
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-40333
Method: X-RAY DIFFRACTION / Resolution: 2.06 Å

PDB-9b9t:
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-40407
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-9b9w:
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-40792
Method: X-RAY DIFFRACTION / Resolution: 1.92 Å

PDB-9ba2:
Crystal structure of the binary complex of DCAF1 and WDR5
Method: X-RAY DIFFRACTION / Resolution: 2.97 Å

PDB-9dlw:
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-41114
Method: X-RAY DIFFRACTION / Resolution: 2.07 Å

Chemicals

PDB-1am2:
GYRA INTEIN FROM MYCOBACTERIUM XENOPI

ChemComp-HOH:
WATER

PDB-1anm:
Unknown entry

PDB-1ann:
ANNEXIN IV

ChemComp-IMD:
IMIDAZOLE

PDB-1baf:
2.9 ANGSTROMS RESOLUTION STRUCTURE OF AN ANTI-DINITROPHENYL-SPIN-LABEL MONOCLONAL ANTIBODY FAB FRAGMENT WITH BOUND HAPTEN

Source
  • homo sapiens (human)
KeywordsPROTEIN BINDING / E3 ligase / adaptor / PROTAC / WDR / ternary complex

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