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Structure paper

TitleEvidence for the Quercetin Binding Site of Glycogen Phosphorylase as a Target for Liver-Isoform-Selective Inhibitors against Glioblastoma: Investigation of Flavanols Epigallocatechin Gallate and Epigallocatechin.
Journal, issue, pagesJ. Agric. Food Chem., Vol. 72, Page 24070-24081, Year 2024
Publish dateSep 25, 2023 (structure data deposition date)
AuthorsAlexopoulos, S. / McGawley, M. / Mathews, R. / Papakostopoulou, S. / Koulas, S. / Leonidas, D.D. / Zwain, T. / Hayes, J.M. / Skamnaki, V.
External linksJ. Agric. Food Chem. / PubMed:39433280
MethodsX-ray diffraction
Resolution2 - 2.5 Å
Structure data

PDB-8qmu:
The complex of Glycogen Phosphorylase with (-)-Epigallocatechin-3-gallate (EGCG).
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-8r52:
The complex of Glycogen Phosphorylase with epigallocatechin (EGC).
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-8r53:
The complex of Glycogen Phosphorylase with (-)-Epigallocatechin-3-gallate (EGCG) and glucose.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-8r6v:
The complex of glycogen phosphorylase with EGCG (epigallocatechin gallate) and caffeine.
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

Chemicals

ChemComp-KDH:
(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate

ChemComp-DMS:
DIMETHYL SULFOXIDE / DMSO, precipitant*YM

ChemComp-HOH:
WATER

ChemComp-EGT:
2-(3,4,5-TRIHYDROXY-PHENYL)-CHROMAN-3,5,7-TRIOL

ChemComp-GLC:
alpha-D-glucopyranose

ChemComp-CFF:
CAFFEINE / medication*YM

Source
  • oryctolagus cuniculus (rabbit)
KeywordsTRANSFERASE / Inhibitor / Glycogen Phosphorylase / Epigallocatechin-3- Gallate / Epigallocatechin / Glucose / Epigallocatechin-3-Gallate / Phosphorylase / EGCG / Caffeine

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