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Structure paper

TitleDeciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
Journal, issue, pagesJ. Biol. Chem., Vol. 300, Page 107646-107646, Year 2024
Publish dateMay 15, 2024 (structure data deposition date)
AuthorsKuttenlochner, W. / Beller, P. / Kaysser, L. / Groll, M.
External linksJ. Biol. Chem. / PubMed:39121999
MethodsX-ray diffraction
Resolution1.4 - 2 Å
Structure data

PDB-9fcd:
CysG(N-16) in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-9fce:
BelI in complex with SAM from Streptomyces sp. UCK14
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-9fcl:
CysG(N-16) in complex with SAM from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-9fcq:
CysG(N-16)-H122A mutant in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-9fcs:
CysG(N-16)-H122N mutant in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-9fcu:
CysG(N-16)-H121A mutant in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-9fcx:
CysG(N-16)-H121N mutant in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-9fcy:
CysG(N-16)-R21K mutant in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-9fd3:
CysG(N-16)-D190N mutant in complex with SAH from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-9g0k:
CysG(N-16) in complex with SAH (metal free, cocrystallization in presence of EDTA) from Kitasatospora cystarginea
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-SAH:
S-ADENOSYL-L-HOMOCYSTEINE

ChemComp-CA:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-CO3:
CARBONATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-SAM:
S-ADENOSYLMETHIONINE

ChemComp-BU3:
(R,R)-2,3-BUTANEDIOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-NA:
Unknown entry

ChemComp-ADE:
ADENINE

Source
  • kitasatospora cystarginea (bacteria)
  • streptomyces sp. (bacteria)
KeywordsTRANSFERASE / Natural Product Biosynthesis / Enzyme Mechanism / Metal Ion interaction / Molecular Docking / Structure Function Relationships

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