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TitleRacemization of the substrate and product by serine palmitoyltransferase from Sphingobacterium multivorum yields two enantiomers of the product from d-serine.
Journal, issue, pagesJ. Biol. Chem., Vol. 300, Page 105728-105728, Year 2024
Publish dateApr 5, 2023 (structure data deposition date)
AuthorsIkushiro, H. / Honda, T. / Murai, Y. / Murakami, T. / Takahashi, A. / Sawai, T. / Goto, H. / Ikushiro, S.I. / Miyahara, I. / Hirabayashi, Y. ...Ikushiro, H. / Honda, T. / Murai, Y. / Murakami, T. / Takahashi, A. / Sawai, T. / Goto, H. / Ikushiro, S.I. / Miyahara, I. / Hirabayashi, Y. / Kamiya, N. / Monde, K. / Yano, T.
External linksJ. Biol. Chem. / PubMed:38325740
MethodsX-ray diffraction
Resolution1.651 - 1.7 Å
Structure data

PDB-8iyp:
Crystal structure of serine palmitoyltransferase soaked in 190 mM D-serine solution
Method: X-RAY DIFFRACTION / Resolution: 1.651 Å

PDB-8iyt:
Crystal Structure of Serine Palmitoyltransferase complexed with D-methylserine
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

Chemicals

ChemComp-PLS:
[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER


ChemComp, No image

ChemComp-S5R:
Unknown entry

Source
  • sphingobacterium multivorum (bacteria)
KeywordsTRANSFERASE / sphingolipid

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