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Structure paper

TitleOn the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Journal, issue, pagesDalton Trans, Vol. 53, Page 3476-3483, Year 2024
Publish dateJan 11, 2023 (structure data deposition date)
AuthorsTroisi, R. / Tito, G. / Ferraro, G. / Sica, F. / Massai, L. / Geri, A. / Cirri, D. / Messori, L. / Merlino, A.
External linksDalton Trans / PubMed:38270175
MethodsX-ray diffraction
Resolution1.4 - 2.51 Å
Structure data

PDB-8c62:
Crystal structure of cisplatin/B-DNA adduct
Method: X-RAY DIFFRACTION / Resolution: 2.31 Å

PDB-8c63:
Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 4 h of soaking
Method: X-RAY DIFFRACTION / Resolution: 1.52 Å

PDB-8c64:
Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 48 h of soaking
Method: X-RAY DIFFRACTION / Resolution: 2.51 Å

PDB-8ri3:
Crystal structure of transplatin/B-DNA adduct obtained upon 7 days of soaking
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-8ri5:
Crystal structure of transplatin/B-DNA adduct obtained upon 48 h of soaking
Method: X-RAY DIFFRACTION / Resolution: 1.415 Å

Chemicals

ChemComp-PT:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-MG:
Unknown entry

ChemComp-A6R:
arsenoplatin-1

ChemComp-NH3:
AMMONIA

ChemComp-CL:
Unknown entry

Source
  • synthetic construct (others)
  • dna molecule (others)
KeywordsDNA / Duplex / B-DNA / Cisplatin / Anticancer agent / Metallodrug / Arsenoplatin-1 / dodecamer / platin / interaction / dickerson / platinum

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