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Structure paper

TitleDephosphocholination by Legionella effector Lem3 functions through remodelling of the switch II region of Rab1b.
Journal, issue, pagesNat Commun, Vol. 14, Page 2245-2245, Year 2023
Publish dateJul 20, 2022 (structure data deposition date)
AuthorsKaspers, M.S. / Pogenberg, V. / Pett, C. / Ernst, S. / Ecker, F. / Ochtrop, P. / Groll, M. / Hedberg, C. / Itzen, A.
External linksNat Commun / PubMed:37076474
MethodsX-ray diffraction
Resolution2.15 - 3.6 Å
Structure data

PDB-8agg:
Structure of the Legionella phosphocholine hydrolase Lem3
Method: X-RAY DIFFRACTION / Resolution: 3.6 Å

PDB-8alk:
Structure of the Legionella phosphocholine hydrolase Lem3 in complex with its substrate Rab1
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-8anp:
Legionella effector Lem3 mutant D190A in complex with Mg2+
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

ChemComp-OJU:
2-[[[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxyethyl-[3-(2-chloranylethanoylamino)propyl]-dimethyl-azanium

ChemComp-HOH:
WATER

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-SO4:
SULFATE ION

Source
  • legionella pneumophila (bacteria)
  • homo sapiens (human)
KeywordsHYDROLASE / Bacterial effector / dephosphocholinase / Legionella pneumophila / METAL BINDING PROTEIN / Legionella effector Lem3 displaces the switch II region of Rab1b for dephosphocholination

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