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TitleThe structure and molecular dynamics of prolyl oligopeptidase from Microbulbifer arenaceous provide insights into catalytic and regulatory mechanisms.
Journal, issue, pagesActa Crystallogr D Struct Biol, Vol. 78, Page 735-751, Year 2022
Publish dateSep 15, 2021 (structure data deposition date)
AuthorsHuang, P. / Lv, A. / Yan, Q. / Jiang, Z. / Yang, S.
External linksActa Crystallogr D Struct Biol / PubMed:35647921
MethodsX-ray diffraction
Resolution2.227 - 2.722 Å
Structure data

PDB-7vgb:
Crystal structure of apo prolyl oligopeptidase from Microbulbifer arenaceous
Method: X-RAY DIFFRACTION / Resolution: 2.227 Å

PDB-7vgc:
Crystal structure of prolyl oligopeptidase from Microbulbifer arenaceous complex with a transition state analog inhibitor ZPR
Method: X-RAY DIFFRACTION / Resolution: 2.722 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-IMD:
IMIDAZOLE

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-NI:
NICKEL (II) ION

ChemComp-TMO:
trimethylamine oxide

ChemComp-HOH:
WATER

ChemComp-ZPR:
N-BENZYLOXYCARBONYL-L-PROLYL-L-PROLINAL

ChemComp-CL:
Unknown entry

Source
  • microbulbifer arenaceous (bacteria)
KeywordsHYDROLASE / S9A / prolyl endopeptidase / serine protease / mental disorder / amnesia

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