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TitleA Class of Shark-Derived Single-Domain Antibodies can Broadly Neutralize SARS-Related Coronaviruses and the Structural Basis of Neutralization and Omicron Escape.
Journal, issue, pagesSmall Methods, Vol. 6, Page e2200387-e2200387, Year 2022
Publish dateJul 11, 2021 (structure data deposition date)
AuthorsFeng, B. / Chen, Z. / Sun, J. / Xu, T. / Wang, Q. / Yi, H. / Niu, X. / Zhu, J. / Fan, M. / Hou, R. ...Feng, B. / Chen, Z. / Sun, J. / Xu, T. / Wang, Q. / Yi, H. / Niu, X. / Zhu, J. / Fan, M. / Hou, R. / Shao, Y. / Huang, S. / Li, C. / Hu, P. / Zheng, P. / He, P. / Luo, J. / Yan, Q. / Xiong, X. / Liu, J. / Zhao, J. / Chen, L.
External linksSmall Methods / PubMed:35583124
MethodsX-ray diffraction
Resolution1.9 - 2.85 Å
Structure data

PDB-7fbj:
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing nanobody 17F6
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

PDB-7fbk:
Crystal structure of SARS-CoV-2 receptor binding domain N501Y mutant in complex with neutralizing nanobody 20G6
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-HOH:
WATER

Source
  • severe acute respiratory syndrome coronavirus 2
  • chiloscyllium plagiosum (whitespotted bambooshark)
KeywordsVIRAL PROTEIN/IMMUNE SYSTEM / SARS-CoV-2 / Spike glycoprotein / RBD / VNAR / VIRAL PROTEIN / VIRAL PROTEIN-IMMUNE SYSTEM complex

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