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Structure paper

TitleThe LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 118, Year 2021
Publish dateApr 19, 2021 (structure data deposition date)
AuthorsRankin, J.A. / Chatterjee, S. / Tariq, Z. / Lagishetty, S. / Desguin, B. / Hu, J. / Hausinger, R.P.
External linksProc. Natl. Acad. Sci. USA / PubMed:34548397
MethodsX-ray diffraction
Resolution2.8 - 3.402 Å
Structure data

PDB-7mj0:
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with adenosine monophosphate AMP
Method: X-RAY DIFFRACTION / Resolution: 3.01 Å

PDB-7mj1:
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with NAD
Method: X-RAY DIFFRACTION / Resolution: 3.402 Å

PDB-7mj2:
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zn
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

Chemicals

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-MG:
Unknown entry

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-NAI:
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

Source
  • lactobacillus plantarum (bacteria)
KeywordsLYASE (CARBON-CARBON) / Carboxylase / Hydrolase

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