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TitleMechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2.
Journal, issue, pagesMol. Cell, Vol. 81, Page 4176-4190.e6, Year 2021
Publish dateJan 8, 2020 (structure data deposition date)
AuthorsAbdul Rehman, S.A. / Armstrong, L.A. / Lange, S.M. / Kristariyanto, Y.A. / Grawert, T.W. / Knebel, A. / Svergun, D.I. / Kulathu, Y.
External linksMol. Cell / PubMed:34529927
MethodsX-ray diffraction
Resolution2 - 3.59 Å
Structure data

PDB-6tuv:
Crystal structure of Mindy1 in complex with Lys48 linked di-ubiquitin
Method: X-RAY DIFFRACTION / Resolution: 2.16 Å

PDB-6txb:
Crystal structure of Mindy1 mutant (P138A) in complex with Lys48 linked di-ubiquitin
Method: X-RAY DIFFRACTION / Resolution: 2.18 Å

PDB-6y6r:
Crystal structure of MINDY1 T335D mutant
Method: X-RAY DIFFRACTION / Resolution: 3.32 Å

PDB-6yjg:
Crystal structure of MINDY1 mutant-Y114F
Method: X-RAY DIFFRACTION / Resolution: 3.28 Å

PDB-6z49:
Crystal structure of deubiquitinase Mindy2
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6z7v:
Crystal structure of Mindy2 (C266A) in complex with Lys48 linked di-ubiquitin (K48-Ub2)
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-6z90:
Crystal structure of MINDY1 mutant-P138A
Method: X-RAY DIFFRACTION / Resolution: 3.59 Å

PDB-7npi:
Crystal structure of Mindy2 (C266A) in complex with Lys48-linked penta-ubiquitin (K48-Ub5)
Method: X-RAY DIFFRACTION / Resolution: 2.81 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-K:
Unknown entry

Source
  • homo sapiens (human)
KeywordsHYDROLASE / CYSTEINE PROTEASE / ISOPEPTIDASE AND UBIQUITIN BINDING / SIGNALING PROTEIN / Ubiquitin / Branched / Heterotypic / Nanobody / Synthetic nanobody

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