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Structure paper

TitleCrystal structure and functional characterization of an oligosaccharide dehydrogenase from Pycnoporus cinnabarinus provides insights into fungal breakdown of lignocellulose.
Journal, issue, pagesBiotechnol Biofuels, Vol. 14, Page 161-161, Year 2021
Publish dateJan 21, 2020 (structure data deposition date)
AuthorsCerutti, G. / Gugole, E. / Montemiglio, L.C. / Turbe-Doan, A. / Chena, D. / Navarro, D. / Lomascolo, A. / Piumi, F. / Exertier, C. / Freda, I. ...Cerutti, G. / Gugole, E. / Montemiglio, L.C. / Turbe-Doan, A. / Chena, D. / Navarro, D. / Lomascolo, A. / Piumi, F. / Exertier, C. / Freda, I. / Vallone, B. / Record, E. / Savino, C. / Sciara, G.
External linksBiotechnol Biofuels / PubMed:34294139
MethodsX-ray diffraction
Resolution1.57 - 1.75 Å
Structure data

PDB-6xut:
Crystallographic structure of oligosaccharide dehydrogenase from Pycnoporus cinnabarinus, ligand-free form
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-6xuu:
Crystallographic structure of oligosaccharide dehydrogenase from Pycnoporus cinnabarinus, glucose-bound form
Method: X-RAY DIFFRACTION / Resolution: 1.57 Å

PDB-6xuv:
Crystallographic structure of oligosaccharide dehydrogenase from Pycnoporus cinnabarinus, laminaribiose-bound form
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

Chemicals

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-BGC:
beta-D-glucopyranose

ChemComp-GLC:
alpha-D-glucopyranose

Source
  • pycnoporus cinnabarinus (fungus)
  • trametes cinnabarina (fungus)
KeywordsOXIDOREDUCTASE / Glucose dehydrogenase / Pycnoporus cinnabarinus / oligosaccharide dehydrogenase / Glucose / Laminaribiose

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