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TitlePerturbing the Movement of Hydrogens to Delineate and Assign Events in the Reductive Activation and Turnover of Porcine Dihydropyrimidine Dehydrogenase.
Journal, issue, pagesBiochemistry, Vol. 60, Page 1764-1775, Year 2021
Publish dateMar 18, 2021 (structure data deposition date)
AuthorsBeaupre, B.A. / Forouzesh, D.C. / Butrin, A. / Liu, D. / Moran, G.R.
External linksBiochemistry / PubMed:34032117
MethodsX-ray diffraction
Resolution1.69 - 1.82 Å
Structure data

PDB-7m31:
Dihydropyrimidine Dehydrogenase (DPD) C671S Mutant Soaked with Thymine and NADPH Anaerobically
Method: X-RAY DIFFRACTION / Resolution: 1.69 Å

PDB-7m32:
Dihydropyrimidine Dehydrogenase (DPD) C671A Mutant Soaked with Uracil and NADPH Anaerobically
Method: X-RAY DIFFRACTION / Resolution: 1.82 Å

Chemicals

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-NAP:
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

ChemComp-FMN:
FLAVIN MONONUCLEOTIDE

ChemComp-TDR:
THYMINE

ChemComp-PRO:
PROLINE

ChemComp-HOH:
WATER

ChemComp-URA:
URACIL

ChemComp-FNR:
1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL

ChemComp-ALA:
ALANINE

ChemComp-LEU:
LEUCINE

Source
  • sus scrofa (pig)
KeywordsFLAVOPROTEIN / Dihydropyrimidine Dehydrogenase / DPD / mutant / uracil / flavin / soaking / ligand / FMN / FAD / Oxidoreductase

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