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Structure paper

TitleStructure and dynamics of an alpha-fucosidase reveal a mechanism for highly efficient IgG transfucosylation.
Journal, issue, pagesNat Commun, Vol. 11, Page 6204-6204, Year 2020
Publish dateFeb 18, 2019 (structure data deposition date)
AuthorsKlontz, E.H. / Li, C. / Kihn, K. / Fields, J.K. / Beckett, D. / Snyder, G.A. / Wintrode, P.L. / Deredge, D. / Wang, L.X. / Sundberg, E.J.
External linksNat Commun / PubMed:33277506
MethodsX-ray diffraction
Resolution2 - 3.55 Å
Structure data

PDB-6o18:
Unliganded alpha-L-fucosidase AlfC from Lactobacillus casei
Method: X-RAY DIFFRACTION / Resolution: 2.55 Å

PDB-6o1a:
Alpha-L-fucosidase AlfC from Lactobacillus casei in complex with alpha-L-fucose product
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-6o1c:
Alpha-L-fucosidase AlfC D200A mutant in complex with 4-nitrophenyl-a-L-fucopyranoside substrate
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-6o1i:
Alpha-L-fucosidase AlfC fucosyltransferase mutant E274A
Method: X-RAY DIFFRACTION / Resolution: 3.55 Å

PDB-6o1j:
Alpha-L-fucosidase AlfC fucosyltransferase mutant N243A
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6ohe:
Alpha-L-fucosidase AlfC D200A in complex with Fuca(1,6)GlcNAc
Method: X-RAY DIFFRACTION / Resolution: 3.14 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-FUL:
beta-L-fucopyranose

ChemComp-JFZ:
4-nitrophenyl 6-deoxy-alpha-L-galactopyranoside

Source
  • lactobacillus casei (bacteria)
KeywordsHYDROLASE / Fucosidase / apo / product / fucose / substrate / 4NP-Fuc / 4-nitrophenyl-a-L-fucopyranoside / fucosyltransferase / AlfC / Fuca(1 / 6)GlcNAc

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