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Structure paper

TitleTight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 117, Page 30362-30369, Year 2020
Publish dateMay 6, 2020 (structure data deposition date)
AuthorsCaldwell, S.J. / Haydon, I.C. / Piperidou, N. / Huang, P.S. / Bick, M.J. / Sjostrom, H.S. / Hilvert, D. / Baker, D. / Zeymer, C.
External linksProc. Natl. Acad. Sci. USA / PubMed:33203677
MethodsX-ray diffraction
Resolution1.41 - 2.5 Å
Structure data

PDB-6wvs:
Hyperstable de novo TIM barrel variant DeNovoTIM15
Method: X-RAY DIFFRACTION / Resolution: 2.202 Å

PDB-6wxo:
De novo TIM barrel-ferredoxin fold fusion homodimer with 2-histidine 2-glutamate centre TFD-HE
Method: X-RAY DIFFRACTION / Resolution: 1.41 Å

PDB-6wxp:
De novo TIM barrel-ferredoxin fold fusion homodimer with 4-glutamate centre TFD-EE
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-6zv9:
Terbium(III)-bound de novo TIM barrel-ferredoxin fold fusion dimer with 4-glutamate binding site and tryptophan antenna (TFD-EE N6W)
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-SO4:
SULFATE ION

ChemComp-CA:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-TB:
TERBIUM(III) ION

Source
  • synthetic construct (others)
KeywordsDE NOVO PROTEIN / TIM barrel / hyperstable / symmetric / de novo / repeat protein / ferredoxin fold / homodimer / symmetric fusion / homodimeric fusion / symmetric fusion protein / metal binding / Lanthanide-binding protein

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