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Structure paper

TitleStructural basis for the evolution of cyclic phosphodiesterase activity in the U6 snRNA exoribonuclease Usb1.
Journal, issue, pagesNucleic Acids Res., Vol. 48, Page 1423-1434, Year 2020
Publish dateJun 21, 2019 (structure data deposition date)
AuthorsNomura, Y. / Montemayor, E.J. / Virta, J.M. / Hayes, S.M. / Butcher, S.E.
External linksNucleic Acids Res. / PubMed:31832688
MethodsX-ray diffraction
Resolution1.8 - 1.845 Å
Structure data

PDB-6pfq:
Structure of Kluyveromyces marxianus Usb1
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-6pgl:
Structure of Kluyveromyces marxianus Usb1 with uridine monophosphate
Method: X-RAY DIFFRACTION / Resolution: 1.845 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-U5P:
URIDINE-5'-MONOPHOSPHATE

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-PG6:
1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

Source
  • kluyveromyces marxianus (strain dmku3-1042 / bcc 29191 / nbrc 104275) (yeast)
KeywordsHYDROLASE / exonuclease / U6 snRNA / 2H phosphodiesterase superfamily

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