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Structure paper

TitleCrystal Structure of the Catalytic and CytochromebDomains in a Eukaryotic Pyrroloquinoline Quinone-Dependent Dehydrogenase.
Journal, issue, pagesAppl. Environ. Microbiol., Vol. 85, Year 2019
Publish dateApr 9, 2019 (structure data deposition date)
AuthorsTakeda, K. / Ishida, T. / Yoshida, M. / Samejima, M. / Ohno, H. / Igarashi, K. / Nakamura, N.
External linksAppl. Environ. Microbiol. / PubMed:31604769
MethodsX-ray diffraction
Resolution1.3 - 2 Å
Structure data

PDB-6jt5:
Crystal structure of PQQ doamin of Pyranose Dehydrogenase from Coprinopsis cinerea: apo-from
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-6jt6:
Crystal structure of cytochrome b domain of Pyranose Dehydrogenase from Coprinopsis cinerea
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6jwf:
Holo form of Pyranose Dehydrogenase PQQ domain from Coprinopsis cinerea
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-CA:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-FMT:
FORMIC ACID

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-ACT:
ACETATE ION

ChemComp-PQQ:
PYRROLOQUINOLINE QUINONE

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • coprinopsis cinerea (fungus)
KeywordsOXIDOREDUCTASE / pyrroloquinoline quinone / sugar dehydrogenase / AA family 12 / AA family 8 / quinohemoprotein

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