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Structure paper

TitleStructural basis for activation of a diguanylate cyclase required for bacterial predation in Bdellovibrio.
Journal, issue, pagesNat Commun, Vol. 10, Page 4086-4086, Year 2019
Publish dateAug 13, 2018 (structure data deposition date)
AuthorsMeek, R.W. / Cadby, I.T. / Moynihan, P.J. / Lovering, A.L.
External linksNat Commun / PubMed:31501441
MethodsX-ray diffraction
Resolution1.49 - 1.87 Å
Structure data

PDB-6hbz:
Bdellovibrio bacteriovorus DgcB Full-length
Method: X-RAY DIFFRACTION / Resolution: 1.79 Å

PDB-6hc0:
Bdellovibrio bacteriovorus DgcB FHA domain, tail complex
Method: X-RAY DIFFRACTION / Resolution: 1.87 Å

PDB-6hc1:
Bdellovibrio bacteriovorus DgcB FHA in complex with phosphorylated N-terminal peptide
Method: X-RAY DIFFRACTION / Resolution: 1.49 Å

Chemicals

ChemComp-C2E:
9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)

ChemComp-CL:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-FMT:
FORMIC ACID

Source
  • bdellovibrio bacteriovorus (strain atcc 15356 / dsm 50701 / ncib 9529 / hd100) (bacteria)
  • bdellovibrio bacteriovorus hd100 (bacteria)
KeywordsSIGNALING PROTEIN / GGDEF / FHA / c-di-GMP / diguanylate cyclase

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