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Structure paper

TitleThe predominance of nucleotidyl activation in bacterial phosphonate biosynthesis.
Journal, issue, pagesNat Commun, Vol. 10, Page 3698-3698, Year 2019
Publish dateJun 18, 2019 (structure data deposition date)
AuthorsRice, K. / Batul, K. / Whiteside, J. / Kelso, J. / Papinski, M. / Schmidt, E. / Pratasouskaya, A. / Wang, D. / Sullivan, R. / Bartlett, C. ...Rice, K. / Batul, K. / Whiteside, J. / Kelso, J. / Papinski, M. / Schmidt, E. / Pratasouskaya, A. / Wang, D. / Sullivan, R. / Bartlett, C. / Weadge, J.T. / Van der Kamp, M.W. / Moreno-Hagelsieb, G. / Suits, M.D. / Horsman, G.P.
External linksNat Commun / PubMed:31420548
MethodsX-ray diffraction
Resolution1.95 - 2.72 Å
Structure data

PDB-6pd1:
PntC-AEPT: fusion protein of phosphonate-specific cytidylyltransferase and 2-aminoethylphosphonate (AEP) transaminase from Treponema denticola
Method: X-RAY DIFFRACTION / Resolution: 2.72 Å

PDB-6pd2:
PntC-AEPT: fusion protein of phosphonate-specific cytidylyltransferase and 2-aminoethylphosphonate (AEP) transaminase from Treponema denticola in complex with cytidine monophosphate-AEP
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-GOL:
GLYCEROL

ChemComp-NI:
NICKEL (II) ION

ChemComp-HOH:
WATER

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-PO4:
PHOSPHATE ION

ChemComp-0RC:
5'-O-[(S)-{[(R)-(2-aminoethyl)(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine

ChemComp-ACT:
ACETATE ION

Source
  • treponema denticola (strain atcc 35405 / cip 103919 / dsm 14222) (bacteria)
KeywordsBIOSYNTHETIC PROTEIN / Phosphonate / Cytidylyltransferase / Cytidine monophosphate- 2-aminoethylphosphonate (CMP-AEP)

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