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Structure paper

TitlePerturbation of Short Hydrogen Bonds in Photoactive Yellow Protein via Noncanonical Amino Acid Incorporation.
Journal, issue, pagesJ. Phys. Chem. B, Vol. 123, Page 4844-4849, Year 2019
Publish dateSep 18, 2018 (structure data deposition date)
AuthorsThomson, B. / Both, J. / Wu, Y. / Parrish, R.M. / Martinez, T.J. / Boxer, S.G.
External linksJ. Phys. Chem. B / PubMed:31117606
MethodsX-ray diffraction
Resolution1.228 - 1.67 Å
Structure data

PDB-6mhi:
Photoactive Yellow Protein with covalently bound 3,5-dichloro-4-hydroxycinnamic acid chromophore
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

PDB-6mhn:
Photoactive Yellow Protein with covalently bound 3-chloro-4-hydroxycinnamic acid chromophore
Method: X-RAY DIFFRACTION / Resolution: 1.67 Å

PDB-6mkt:
Photoactive Yellow Protein with 3-chlorotyrosine substituted at position 42
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-6mmd:
Photoactive Yellow Protein with 3,5-dichlorotyrosine substituted at position 42
Method: X-RAY DIFFRACTION / Resolution: 1.228 Å

Chemicals

ChemComp-YYZ:
(2E)-3-(3,5-dichloro-4-hydroxyphenyl)prop-2-enoic acid

ChemComp-HOH:
WATER

ChemComp-YAZ:
(2E)-3-(3-chloro-4-hydroxyphenyl)prop-2-enoic acid

ChemComp-HC4:
4'-HYDROXYCINNAMIC ACID

Source
  • halorhodospira halophila (bacteria)
KeywordsSIGNALING PROTEIN / chlorinated chromophore / hydrogen bonding network / active site / low-barrier hydrogen bond

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