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Structure paper

TitleSurface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
Journal, issue, pagesCell. Mol. Life Sci., Vol. 76, Page 4319-4340, Year 2019
Publish dateJun 5, 2018 (structure data deposition date)
AuthorsTamura, K. / Foley, M.H. / Gardill, B.R. / Dejean, G. / Schnizlein, M. / Bahr, C.M.E. / Louise Creagh, A. / van Petegem, F. / Koropatkin, N.M. / Brumer, H.
External linksCell. Mol. Life Sci. / PubMed:31062073
MethodsX-ray diffraction
Resolution1.5 - 3.15 Å
Structure data

PDB-6dmf:
Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-A with cellohexaose
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-6e57:
Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-B in complex with mixed-linkage heptasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.71 Å

PDB-6e60:
Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-A
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-6e61:
Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-A in complex with mixed-linkage heptasaccharide
Method: X-RAY DIFFRACTION / Resolution: 2.51 Å

PDB-6e9b:
Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-B in complex with mixed-linkage heptasaccharide
Method: X-RAY DIFFRACTION / Resolution: 3.15 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-ACT:
ACETATE ION

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-NA:
Unknown entry

ChemComp-SO4:
SULFATE ION

Source
  • bacteroides ovatus (strain atcc 8483 / dsm 1896 / jcm 5824 / nctc 11153) (bacteria)
  • bacteroides ovatus (bacteria)
KeywordsSUGAR BINDING PROTEIN / SGBP-A / Bacteroides ovatus / SusD / beta-glucan / mixed-linkage beta-glucan / surface glycan binding protein / Bacteroides / tetratricopeptide repeat / outer membrane protein / binding protein

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