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Structure paper

TitleStructure of Prototypic Peptide Transporter DtpA from E. coli in Complex with Valganciclovir Provides Insights into Drug Binding of Human PepT1.
Journal, issue, pagesJ. Am. Chem. Soc., Vol. 141, Page 2404-2412, Year 2019
Publish dateJun 13, 2018 (structure data deposition date)
AuthorsUral-Blimke, Y. / Flayhan, A. / Strauss, J. / Rantos, V. / Bartels, K. / Nielsen, R. / Pardon, E. / Steyaert, J. / Kosinski, J. / Quistgaard, E.M. / Low, C.
External linksJ. Am. Chem. Soc. / PubMed:30644743
MethodsX-ray diffraction
Resolution2.645 - 3.3 Å
Structure data

PDB-6gs1:
Crystal structure of peptide transporter DtpA-nanobody in MES buffer
Method: X-RAY DIFFRACTION / Resolution: 3.29 Å

PDB-6gs4:
Crystal structure of peptide transporter DtpA-nanobody in complex with valganciclovir
Method: X-RAY DIFFRACTION / Resolution: 2.645 Å

PDB-6gs7:
Crystal structure of peptide transporter DtpA-nanobody in glycine buffer
Method: X-RAY DIFFRACTION / Resolution: 3.3 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-F9E:
[(2~{S})-2-[(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)methoxy]-3-oxidanyl-propyl] (2~{S})-2-azanyl-3-methyl-butanoate

ChemComp-LMT:
DODECYL-BETA-D-MALTOSIDE / detergent*YM

Source
  • escherichia coli (strain k12) (bacteria)
  • lama glama (llama)
  • escherichia coli k-12 (bacteria)
KeywordsMEMBRANE PROTEIN / peptide transporter / complex with nanobody / SLC15 family member

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