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TitleCryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Journal, issue, pagesCell Rep, Vol. 26, Issue 1, Page 29-36.e3, Year 2019
Publish dateJan 2, 2019
AuthorsSukyeong Lee / Soung Hun Roh / Jungsoon Lee / Nuri Sung / Jun Liu / Francis T F Tsai /
PubMed AbstractHsp104 is a ring-forming, ATP-driven molecular machine that recovers functional protein from both stress-denatured and amyloid-forming aggregates. Although Hsp104 shares a common architecture with ...Hsp104 is a ring-forming, ATP-driven molecular machine that recovers functional protein from both stress-denatured and amyloid-forming aggregates. Although Hsp104 shares a common architecture with Clp/Hsp100 protein unfoldases, different and seemingly conflicting 3D structures have been reported. Examining the structure of Hsp104 poses considerable challenges because Hsp104 readily hydrolyzes ATP, whereas ATP analogs can be slowly turned over and are often contaminated with other nucleotide species. Here, we present the single-particle electron cryo-microscopy (cryo-EM) structures of a catalytically inactive Hsp104 variant (Hsp104) in the ATP-bound state determined between 7.7 Å and 9.3 Å resolution. Surprisingly, we observe that the Hsp104 hexamer adopts distinct ring conformations (closed, extended, and open) despite being in the same nucleotide state. The latter underscores the structural plasticity of Hsp104 in solution, with different conformations stabilized by nucleotide binding. Our findings suggest that, in addition to ATP hydrolysis-driven conformational changes, Hsp104 uses stochastic motions to translocate unfolded polypeptides.
External linksCell Rep / PubMed:30605683 / PubMed Central
MethodsEM (single particle)
Resolution7.7 - 9.3 Å
Structure data

EMDB-0375, PDB-6n8t:
Hsp104DWB closed conformation
Method: EM (single particle) / Resolution: 7.7 Å

EMDB-0376, PDB-6n8v:
Hsp104DWB open conformation
Method: EM (single particle) / Resolution: 9.3 Å

EMDB-0377, PDB-6n8z:
HSP104DWB extended conformation
Method: EM (single particle) / Resolution: 9.3 Å

Chemicals

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

Source
  • saccharomyces cerevisiae (brewer's yeast)
  • saccharomyces cerevisiae (strain atcc 204508 / s288c) (yeast)
KeywordsCHAPERONE / Hsp104 / ClpB / protein disaggregase / molecular chaperone / AAA+ / ATPase / cryo-EM

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