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TitleEndo-fucoidan hydrolases from glycoside hydrolase family 107 (GH107) display structural and mechanistic similarities to alpha-l-fucosidases from GH29.
Journal, issue, pagesJ. Biol. Chem., Vol. 293, Page 18296-18308, Year 2018
Publish dateJun 1, 2018 (structure data deposition date)
AuthorsVickers, C. / Liu, F. / Abe, K. / Salama-Alber, O. / Jenkins, M. / Springate, C.M.K. / Burke, J.E. / Withers, S.G. / Boraston, A.B.
External linksJ. Biol. Chem. / PubMed:30282808
MethodsX-ray diffraction
Resolution1.55 - 2.85 Å
Structure data

PDB-6dlh:
Endo-fucoidan hydrolase MfFcnA4 from glycoside hydrolase family 107
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-6dms:
Endo-fucoidan hydrolase MfFcnA4_H294Q from glycoside hydrolase family 107
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

PDB-6dns:
Endo-fucoidan hydrolase MfFcnA9 from glycoside hydrolase family 107
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

PDB-6m8n:
Endo-fucoidan hydrolase P5AFcnA from glycoside hydrolase family 107
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-CA:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-MLI:
MALONATE ION

Source
  • mariniflexile fucanivorans (bacteria)
  • psychromonas (bacteria)
KeywordsHYDROLASE / fucan / fucoidan / glycoside hydrolase / retaining mechanism

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