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Structure paper

TitleStructural and biochemical analysis of the dual-specificity Trm10 enzyme fromThermococcus kodakaraensisprompts reconsideration of its catalytic mechanism.
Journal, issue, pagesRNA, Vol. 24, Page 1080-1092, Year 2018
Publish dateOct 3, 2017 (structure data deposition date)
AuthorsSingh, R.K. / Feller, A. / Roovers, M. / Van Elder, D. / Wauters, L. / Droogmans, L. / Versees, W.
External linksRNA / PubMed:29848639
MethodsX-ray diffraction
Resolution1.794 - 2.90001435892 Å
Structure data

PDB-6ems:
Crystal Structure of dual specific Trm10 construct from Thermococcus kodakaraensis.
Method: X-RAY DIFFRACTION / Resolution: 1.996 Å

PDB-6emt:
Crystal Structure of dual specific Trm10 construct from Thermococcus kodakaraensis.
Method: X-RAY DIFFRACTION / Resolution: 1.794 Å

PDB-6emu:
Crystal Structure of dual specific Trm10 construct from Thermococcus kodakaraensis.
Method: X-RAY DIFFRACTION / Resolution: 2.29745444787 Å

PDB-6emv:
Crystal Structure of dual specific Trm10 construct from Thermococcus kodakaraensis.
Method: X-RAY DIFFRACTION / Resolution: 2.90001435892 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-ACT:
ACETATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-SAM:
S-ADENOSYLMETHIONINE

ChemComp-SAH:
S-ADENOSYL-L-HOMOCYSTEINE

Source
  • thermococcus kodakarensis (strain atcc baa-918 / jcm 12380 / kod1) (archaea)
  • thermococcus kodakarensis (archaea)
KeywordsRNA BINDING PROTEIN / Trm10 / Dual specificity enzymes / SPOUT / MTases

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