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Structure paper

TitleStructural insights into enzymatic [4+2] aza-cycloaddition in thiopeptide antibiotic biosynthesis.
Journal, issue, pagesProc. Natl. Acad. Sci. U.S.A., Vol. 114, Page 12928-12933, Year 2017
Publish dateJun 22, 2017 (structure data deposition date)
AuthorsCogan, D.P. / Hudson, G.A. / Zhang, Z. / Pogorelov, T.V. / van der Donk, W.A. / Mitchell, D.A. / Nair, S.K.
External linksProc. Natl. Acad. Sci. U.S.A. / PubMed:29158402
MethodsX-ray diffraction
Resolution1.23 - 2.8 Å
Structure data

PDB-5w98:
Pyridine synthase, PbtD, from GE2270 biosynthesis
Method: X-RAY DIFFRACTION / Resolution: 1.23 Å

PDB-5w99:
Pyridine synthase, PbtD, from GE2270 biosynthesis bound to TSP
Method: X-RAY DIFFRACTION / Resolution: 1.59 Å

PDB-5wa3:
Pyridine synthase, TbtD, from thiomuracin biosynthesis
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-5wa4:
Pyridine synthase, TbtD, from thiomuracin biosynthesis bound to an N-terminal leader peptide fragment
Method: X-RAY DIFFRACTION / Resolution: 2.646 Å

Chemicals

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-HOH:
WATER

ChemComp-A1V:
2,2'-(6-(2'-(aminomethyl)-[2,4'-bithiazol]-4-yl)pyridine-2,5-diyl)bis(thiazole-4-carboxylic acid)

ChemComp-SO4:
SULFATE ION

Source
  • planobispora rosea (bacteria)
  • thermobispora bispora (bacteria)
  • thermobispora bispora (strain atcc 19993 / dsm 43833 / cbs 139.67 / jcm 10125 / nbrc 14880 / r51) (bacteria)
KeywordsBIOSYNTHETIC PROTEIN / pyridine synthase / Diels-Alder / thiopeptide / thiomuracin

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