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Structure paper

TitleCrystal structure of dipeptidyl peptidase III from the human gut symbiont Bacteroides thetaiotaomicron.
Journal, issue, pagesPLoS ONE, Vol. 12, Page e0187295-e0187295, Year 2017
Publish dateFeb 27, 2017 (structure data deposition date)
AuthorsSabljic, I. / Mestrovic, N. / Vukelic, B. / Macheroux, P. / Gruber, K. / Luic, M. / Abramic, M.
External linksPLoS ONE / PubMed:29095893
MethodsX-ray diffraction
Resolution1.9 - 3.29 Å
Structure data

PDB-5na6:
Structure of Cys-null Se-Met DPP III from Bacteroides thetaiotaomicron
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-5na7:
Structure of DPP III from Bacteroides thetaiotaomicron
Method: X-RAY DIFFRACTION / Resolution: 2.401 Å

PDB-5na8:
Structure of DPP III from Bacteroides thetaiotaomicron in closed form
Method: X-RAY DIFFRACTION / Resolution: 3.29 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-ACT:
ACETATE ION

ChemComp-NA:
Unknown entry

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-PE3:
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-CL:
Unknown entry

Source
  • bacteroides thetaiotaomicron (strain atcc 29148 / dsm 2079 / nctc 10582 / e50 / vpi-5482) (bacteria)
KeywordsHYDROLASE / Bacteroides thetaiotaomicron / Metallopeptidase / Dipeptidyl peptidase III / Zinc-Hydrolase / Cys-null / closed form

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