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Structure paper

TitleStepwise Evolution Improves Identification of Diverse Peptides Binding to a Protein Target.
Journal, issue, pagesSci Rep, Vol. 7, Page 12116-12116, Year 2017
Publish dateFeb 21, 2017 (structure data deposition date)
AuthorsLyamichev, V.I. / Goodrich, L.E. / Sullivan, E.H. / Bannen, R.M. / Benz, J. / Albert, T.J. / Patel, J.J.
External linksSci Rep / PubMed:28935886
MethodsX-ray diffraction
Resolution1.03 - 1.61 Å
Structure data

PDB-5n7x:
CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE EWVHPQFEQKAK
Method: X-RAY DIFFRACTION / Resolution: 1.12 Å

PDB-5n89:
CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE GNSFDDWLASKG
Method: X-RAY DIFFRACTION / Resolution: 1.27 Å

PDB-5n8b:
CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE AFPDYLAEYHGG
Method: X-RAY DIFFRACTION / Resolution: 1.03 Å

PDB-5n8e:
CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE RDPAPAWAHGGG
Method: X-RAY DIFFRACTION / Resolution: 1.1 Å

PDB-5n8j:
CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE D-amino acid containing peptide GyGlanvdessG
Method: X-RAY DIFFRACTION / Resolution: 1.05 Å

PDB-5n8t:
CRYSTAL STRUCTURE OF STREPTAVIDIN D-amino acid containing peptide Gdlwqheatwkkq
Method: X-RAY DIFFRACTION / Resolution: 1.61 Å

PDB-5n8w:
CRYSTAL STRUCTURE OF STREPTAVIDIN with D-amino acid containing peptide GGwhdeatwkpG
Method: X-RAY DIFFRACTION / Resolution: 1.1 Å

PDB-5n99:
CRYSTAL STRUCTURE OF STREPTAVIDIN with cyclic peptide NQpWQ
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-NA:
Unknown entry

ChemComp-IPA:
ISOPROPYL ALCOHOL / alkaloid*YM

ChemComp-DLE:
D-LEUCINE

ChemComp-DTR:
D-TRYPTOPHAN

ChemComp-DGN:
D-GLUTAMINE

ChemComp-DHI:
D-HISTIDINE

ChemComp-DGL:
D-GLUTAMIC ACID

ChemComp-DAL:
D-ALANINE

ChemComp-DTH:
D-THREONINE

ChemComp-DLY:
D-LYSINE

Source
  • streptomyces avidinii (bacteria)
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsBIOTIN BINDING PROTEIN / STREPTAVIDIN / HPQ MOTIF / STREPTAVIDIN PEPTIDE 11101 COMPLEX / STREPTAVIDIN PEPTIDE COMPLEX / BIOTIN BINDING / D-AMINO ACIDS / D-AMINO ACID / STREPTAVIDIN CYCLIC PEPTIDE COMPLEX

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