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Structure paper

TitleCrystallographic and SAXS studies of S-adenosyl-l-homocysteine hydrolase from Bradyrhizobium elkanii.
Journal, issue, pagesIUCrJ, Vol. 4, Page 271-282, Year 2017
Publish dateOct 21, 2016 (structure data deposition date)
AuthorsManszewski, T. / Szpotkowski, K. / Jaskolski, M.
External linksIUCrJ / PubMed:28512574
MethodsX-ray diffraction
Resolution1.54 - 1.951 Å
Structure data

PDB-5m5k:
S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine and cordycepin
Method: X-RAY DIFFRACTION / Resolution: 1.84 Å

PDB-5m65:
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenine
Method: X-RAY DIFFRACTION / Resolution: 1.945 Å

PDB-5m66:
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenosine
Method: X-RAY DIFFRACTION / Resolution: 1.951 Å

PDB-5m67:
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Bradyrhizobium elkanii in complex with adenine and 2'-deoxyadenosine
Method: X-RAY DIFFRACTION / Resolution: 1.54 Å

Chemicals

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-ADN:
ADENOSINE

ChemComp-NA:
Unknown entry

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-3AD:
3'-DEOXYADENOSINE

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-ACT:
ACETATE ION

ChemComp-HOH:
WATER

ChemComp-ADE:
ADENINE

ChemComp-BR:
BROMIDE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-3D1:
(2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol

Source
  • bradyrhizobium elkanii (bacteria)
KeywordsHYDROLASE / SAHase / SAH / SAM-dependent methylation / nitrogen fixation / symbiotic bacteria / NAD / conformational transition / molecular gate / adenosine / cordycepin / adenine / 2`-deoxyadenosine

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