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Structure paper

TitleStructural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase.
Journal, issue, pagesSci Rep, Vol. 7, Page 45389-45389, Year 2017
Publish dateMay 11, 2016 (structure data deposition date)
AuthorsMinges, A. / Ciupka, D. / Winkler, C. / Hoppner, A. / Gohlke, H. / Groth, G.
External linksSci Rep / PubMed:28358005
MethodsX-ray diffraction
Resolution2.898 - 2.9 Å
Structure data

PDB-5jvj:
C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer
Method: X-RAY DIFFRACTION / Resolution: 2.898 Å

PDB-5jvl:
C4-type pyruvate phospate dikinase: nucleotide binding domain with bound ATP analogue
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-5jvn:
C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

Chemicals

ChemComp-PEP:
PHOSPHOENOLPYRUVATE

ChemComp-MG:
Unknown entry

ChemComp-6NQ:
2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid

Source
  • flaveria trinervia (plant)
  • flaveria pringlei (plant)
KeywordsTRANSFERASE / phosphotransferase / nucleotide binding / conformational transition / swiveling mechanism

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