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Structure paper

TitleStructural Insights Into Hdac6 Tubulin Deacetylation and its Selective Inhibition
Journal, issue, pagesNat. Chem. Biol., Vol. 12, Page 748-, Year 2016
Publish dateMar 18, 2016 (structure data deposition date)
AuthorsMiyake, Y. / Keusch, J.J. / Wang, L. / Saito, M. / Hess, D. / Wang, X. / Melancon, B.J. / Helquist, P. / Gut, H. / Matthias, P.
External linksNat. Chem. Biol. / PubMed:27454931
MethodsX-ray diffraction
Resolution1.499 - 2.88 Å
Structure data

PDB-5g0f:
Crystal structure of Danio rerio HDAC6 ZnF-UBP domain
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-5g0g:
Crystal structure of Danio rerio HDAC6 CD1 in complex with trichostatin A
Method: X-RAY DIFFRACTION / Resolution: 1.499 Å

PDB-5g0h:
Crystal structure of Danio rerio HDAC6 CD2 in complex with (S)- trichostatin A
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-5g0i:
Crystal structure of Danio rerio HDAC6 CD1 and CD2 (linker cleaved) in complex with Nexturastat A
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

PDB-5g0j:
Crystal structure of Danio rerio HDAC6 CD1 and CD2 (linker intact) in complex with Nexturastat A
Method: X-RAY DIFFRACTION / Resolution: 2.88 Å

Chemicals

ChemComp-GLY:
GLYCINE

ChemComp-ZN:
Unknown entry

ChemComp-NI:
NICKEL (II) ION

ChemComp-HOH:
WATER

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-TSN:
TRICHOSTATIN A / antifungal, antibiotic*YM

ChemComp-E1Z:
S-Trichostatin A

ChemComp-K:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-N4R:
NEXTURASTAT A

Source
  • danio rerio (zebrafish)
KeywordsCELL CYCLE / UBIQUITIN / UBIQUITIN BINDING / HISTONE / HISTONE DEACETYLASE

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